Sentence examples for divergence calculation from inspiring English sources
Due to the approximation accuracy, momentum conservation and governing equation feasibility, traditional Particle Method, Moving Particle Semi-implicit (MPS) method in this paper, cannot guarantee the accuracy and stability of computation, and the divergence calculation in Navier Stokes equation may cause numerical error in computation domain with discontinuity.
Pairwise sequence alignment, multiple sequence alignment, % identity calculation, distance (divergence) calculation, phylogenetic tree reconstruction and bootstrap analysis were performed using software Clustal×1.8.3 [44], [44].
To avoid issues of excessive divergence resulting in saturation, we restricted the average divergence calculation to those genes with d S <2, following the example of Axelsson et al. (2008).
G+C content and sequence divergence calculations were performed using shareware programs respectively: GCUA (General Codon Usage Analysis) [43] and SNAP (Synonymous Non-synonymous Analysis Program; www.hiv.lanl.gov) [22].
This also resulted in repetitive sequences being excluded from genomic divergence calculations in these earlier studies.
Likewise, all D. arenata samples were removed from the diversity and divergence calculations and multilocus analysis.
Nucleotide diversities and species divergence calculations were performed using MEGA 4.1 [ 25] and DnaSP v5 [ 31].
Because divergence calculations can vary depending on outgroups, genes, or calibration points used in analysis [ 12, 82], divergence times should be interpreted cautiously.
Finally, for each gene category (PCG, tRNA, and rRNA), a concatenated alignment was produced with Geneious (http://www.geneious.com/, last accessed March 11 , 2014 and used in sequence divergence calculations.
This finding was confirmed by comparison of mean ± SD nucleotide divergence calculations compared to subgenotype A2 (1.00 ± 0.55) and to subgenotype A1 (4.52 ± 0.42).
We also provide the divergence index calculations by census tract to facilitate applied research using our data.
