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Transcription of AAT repeats and ATT repeats may produce distinct repeats DNA conformations that may differently be recognized by H-NS, and therefore differently affect the IS1E transpositions.
A minisatellite map is a sequence of symbols that represents the tandem repeat array such that the set of symbols is in one-to-one correspondence with the set of distinct repeats.
Although the short palindromic repeats of the mtDNA share many of the same structural traits as those of the ptDNA (discussed below), they differ by >50% in sequence identity and, therefore, must be considered as distinct repeats relative to those of the plastid genome.
Furthermore, repeated regions of the assembly (see below) did not show extreme coverage values (i.e., they varied between 20-35× 20-35×ar to overall average genome coverage) similaring toat we are noverallrestimaverageenome size due to the co-assembly of distinct repeats into singenomentigs.
The proportions of distinct repeats assigned to six categories of size intervals (30 39, 40 59, 60 89, 90 149, 150 249, and >250 bp) reveal that the distribution of repeat sizes is variable among and within lineages (supplementary fig. S2, Supplementary Material online).
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This method, with higher accuracy and simpler procedure, is universally applicable to all three cases of eigenvalues in the unperturbed system: distinct, repeated and closely spaced eigenvalues.
This 'unit' of the repeated pattern represents one puff from the machine entering the chamber and is particularly evident with the higher tar delivery 3R4F reference cigarette, with 30 distinct repeating units per puff (Figure 3A).
Three distinct repeated-measures ANOVAs (treating subjects as a random factor) were performed to test the significance of the ARM and SDA effects using the continuous imaging data.
This result is consistent with a recent analysis of resilin by Andersen [31] that identified two distinct repeat types, one of which overlaps with Motif2.
As minimal absent words are intrinsically related to perfect repeats, they are closely dependent upon the overall repeats content in the genome, and distinct repeat classes will be associated to sets of minimal absent words of increasing word length.
The genome of Syn OS-A contains a third CRISPR type with a distinct repeat sequence, which is not found in Syn OS-but but appears to be shared with other microorganisms that inhabit the mat.
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