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Multi-planar reformations (MPR) display the dataset in any imaging plane of the three-dimensional space.
The resulting transverse (i.e., axial) images may then be used to perform the following post-processing techniques: 1. Multi-planar reformations (MPR) display the dataset in any imaging plane of the three-dimensional space.
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Figure 1A displays the dataset of 150 X-ray crystallographically resolved p38 structures retrieved from the PDB and optimally overlaid by ProDy.
Figure 8 and S6 (Additional file 2) display the complementarity between the dataset-exclusive miRNAs and their (miRanda + MapMi -predicted PLA2 and SVMapMi -predictedoci listed in Figure 7.
The 2D MPR is the most relevant reconstruction algorithm as it is capable of displaying the CT dataset in any plane and even in curved planes if desired.
BrainTrap displays the 3D dataset on the website with a slice-by-slice viewing interface, similar to those found in desktop applications.
Hovering the mouse over an allele highlights not only the data under the point but also the name of the line in the lines list, the position on the chromosome display, and graphically displays the entire dataset for the line and marker at that position.
The chemometric strategies of principal component analysis (PCA) and orthogonal partial least-squares-discriminant analysis (OPLS-DA) were used to extract and display the systematic variation in the datasets.
However, do these independent datasets display the same covariation effects?
Oncoprint (cBio Cancer Genomics Portal) uses the same principle to display the alterations across TCGA datasets of a gene set provided by the user.
Considering all 19 inhibitors as well as both the REPTree and SVR regression methods, TSM datasets display the highest overall correlation coefficients (r) between actual and predicted relative susceptibility levels of the constituent HIV-1 PR and RT mutants (Additional file 3), a result similarly reported by the Stanford group (Table 6 in [ 24], available as online supporting information).
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