Exact(21)
The nucleotide diversity (p), base composition, transition to transversion bias (R; [35]), disparity in substitution among nucleotide sites (Disparity Index), and test substitution homogeneity [36] of the aligned sequence was analyzed by MEGA 4.0 [34.0
The disparity index for each domain of SMARCAL1 is presented in Figure 11.
The disparity index did not observed differences in evolutionary patterns for the second HARP domain.
The disparity index for HMGN3a, did not show any significant pairs of species.
In the disparity index for the helicase C-terminal domain only the pair Bos taurus-Canis familiaris was significant.
We used the Disparity Index test [ 52] with P-values estimated from 1000 Monte Carlo based replicates (Additional File 2).
Similar(37)
Apart from the Cp1 sequence in P. stipitis, there were no significant differences among disparity indices within the fungal sequences or within the viral sequences.
The average disparity indices between the groups of sequences from this alignment show Solenogastres distinct from all other mollusks except cephalopods (I D < 1) and are depicted in the lower triangle of table 2. Additionally, we tested the homogeneity of substitution patterns calculating all pair-wise sequence comparisons in Mega 4.0 [ 29].
On the right, we show the average disparity flicker index in this sequence.
On the right side of Fig. 1, we show the average disparity flicker index in this sequence.
By offering geographically-specific information about the status of youth, strengths and challenges, potential areas for investigation and investment, and emerging spatial disparities, the index also offers a basis for targeted action by policy-makers, program leaders and advocacy groups.
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