To verify the interaction between locus and attachment in the CG and MG, separated by age, multi-dimensional analysis was performed, using the HOMALS statistical procedure.
Multi-dimensional scaling analysis was performed using the 'cmdscale' function in R, using the IBS distance matrix of the 3K-RG genomes computed with PLINK49,50 on the filtered SNP set.
For engineering design of liquid lithium (Li) target of the International Fusion Materials Irradiation Facility (IFMIF), two-dimensional hydraulic analysis was performed using code FLUENT.
The comparative two-dimensional gel analysis was performed using an established experimental design [34] in which the high variation between gels is minimized by including a common, labeled pooled sample in all gels.
The two-dimensional cluster analysis was performed using an agglomerative hierarchical clustering algorithm based on the cosine correlation similarity metric.
Three-dimensional motion analysis was performed using a marker-based, 11-camera digital motion capturing system (250 Hz; Qualisys, Gothenburg, Sweden).
Three-dimensional rendering and analysis was performed using COMSTAT software [55] on the Matlab platform.
One-dimensional LC-MS/MS analysis was performed using a linear ion trap and an Orbitrap mass spectrometer (LTQ and LTQ Orbitrap XL, Thermo Fisher Scientific Inc., San Jose, CA) equipped with a nanoelectrospray ion source at 2.0 kV capillary voltage and 200°C capillary temperature.
To investigate the coolant distribution in the reactor core based on the two-layer block facility built at Texas A&M University, a three-dimensional steady-state CFD analysis was performed using the commercial code STAR-CCM+ v6.04.
The numerical analysis was performed using three-dimensional Navier-Stokes equations with a convection diffusion model for the species concentration in a Reynolds number range of 0.2 120.
