Sentence examples for differential expression test from inspiring English sources

That is, the ranking order of betweenness scores was almost completely uncorrelated with the results of differential expression test, and the differentially expressed tests only provide a low accuracy for the prioritization of genes.

We also compared naiveLu, a simple method for identifying differentially expressed genes by simply applying a differential expression test directly without accounting for sample heterogeneity.

Moreover, normalization for the differential expression test expects equivalent expression levels for several co-expressed genes [ 14].

Moreover, the fold-change cutoff method alone as a differential expression test does not account for signal variance and offers no associated level of confidence [27].

Therefore, we still recommend the traditional two-sample t-test as the differential expression test statistic.

The differential expression test on seventy comparisons was implemented in the edgeR [ 46] software.

Differential expression: Differential expression tests were performed using the Reproducible Optimized Test Statistic (ROTS 82 with FDR < 0.05.

Gene expression was analyzed using principal component analysis, differential expression testing, and gene co-expression networks, and the results correlated to season, location, and contaminant burden.

Differential Expression Testing For the 40 subjects, we compared cases and controls stratified by race/ethnicity.

To reduce the number of differential expression tests downstream, thereby increasing overall power, 50% of the lowest normalized Log2 probe-set intensities were removed according to recommendations by Hackstadt and Hess (2009) [49].

Differential expression tests were performed using the R package DESeq [ 11].