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The abundance of expressed genes and the differential expression profiles found in oocytes confirm the hypothesis that oocytes are dynamic cells.
However, differential expression profiles were observed; LbTSP2B is over-expressed in mycelia, LbTSP2C is over-expressed in fruiting bodies and LbTSP2D is over-expressed in mycorrhiza.
Data from the MPSS database suggested that some genes showed differential expression profiles in the developmental organs (Figure 4A).
Zhou et al. (2010) determined differential expression profiles using microarray between 9804-Rxo1 and 9804 in response to inoculation with Xoc strain FJR5.
Next we compared our differential expression profiles with measurements by qPCR.
In addition, differential expression profiles could not be unambiguously assessed for many spots because several proteins were present in individual spots.
Limma very sensitively detects consistent differences in expression, even when these differences are subtle, but permits little flexibility in the types of differential expression profiles found.
The differential expression profiles of these glycolytic enzymes under H2O2 treatments (Table S1 and Figure S2A) indicate their potential roles in the root apoplast under oxidative stress.
Differential expression profiles were determined using Cuffdiff (v. 2.1.1).
Differential expression profiles of genes corroborated RDA data.
This might be attributed to their differential expression profiles in different tissues.
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