Sentence examples for different types of variants from inspiring English sources

Automatic and manual sequence analyses (see methods) identified 239 putative non-synonymous sequence variations, comprised of 174 different types of variants that differed from published sequences (Figure 2, and Supplemental Table S1).

Table 2 shows the different types of variants among the source code.

Different types of variants, for example copy-number variants, insertion/deletion or epigenetic changes as measured by methylation status, have the potential for enlarging the search space for disease-causing variants.

Furthermore, the relative frequencies of different types of variants are more similar in S. medicae than in S. meliloti, the species with the larger effective population size.

However, the equal proportion of the different types of variants in serum-starved versus EGF-treated indicates that the molecular mechanisms involved in the generation of these variants are not regulated by EGF.

The regression analysis is described in more detail in the Additional file 1. Table  9 lists the fractions of different types of variants uniformly called in different fractions of replicates.

We have further examined in detail the performance of these tools on different types of genetic variants, considering not only the distinction between protein variation and DNA variation, but also contrasting performance on different types of variation, e.g. substitutions, deletions, and insertions.

One of the most versatile visualization tools, IGV [ 22, 23], can display different types of genomic variants (for example, copy number variation (CNV), SNPs, loss of heterozygosity (LOH), sequence coverage, among others), but visualization is limited to one genomic phenotype at a time, and thus it is not readily applied to time series data.

Murray raised the issue that differences in the frequency and potency of different types of sequence variants will influence the fitness costs and benefits of different mutations under different settings.

Based on alignments of genomic sequences with full-length cDNA and EST sequences, 1186 Arabidopsis genes in the TIGR database [ 96] have been annotated as undergoing splicing variation and have been classified into five different types of splicing variants.

The enrichment analysis for all disease variants or noncoding disease variants based on allele-frequency-matched genomic background, indicate the distinct particular enriched regulatory regions for different types of disease variants.