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Thus another possible explanation for disagreement between pairs of probe sets is that each is reporting the transcription level of a different transcript of the same gene.
Thus schooled, the software could still identify only 80% of the characters in a different transcript of the same typist on the same machine.
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PoolHap can also be applied to RNA-Seq data to infer the relative abundances of different transcripts of the same gene.
High quality SNP-containing reads were filtered out, with unique match to the RefSeq gene (or different transcripts of the same Entrez gene).
Furthermore, mRNA processing mechanisms can lead to different transcripts of the same gene which can have specific biological functions [1], [2].
The function, or at least coding capacity, of these duplicated DRP-1 genes could be equivalent to the different transcripts of the single DRP-1 gene of other vertebrates.
By removal of different transcripts of the same gene, we identified 234 putative OsWD40 genes.
Three ESTs in SJE017C represent different transcripts of the same gene, as they are not completely identical.
The development of several knockout mouse models, targeting different transcripts of the gene, will continue to provide some insight into this issue.
Cufflinks default settings were adopted and gene FPKM values were computed by summing the FPKM values of different transcripts of the same gene [ 46].
By removal of the same sequences and different transcripts of the same gene, we initially identified 93 putative PTR genes in rice.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com