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There are many different methods of inferring the structure of such regulatory networks in silico.
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A number of different methods for inferring gene regulatory networks (GRNs) from high-throughput data have been proposed [ 14- 20].
Despite differences in the mode of evolution inferred, this result was consistent using three different methods to infer the history of amino acid transporter gene families in our phylogeny thus, revealing a strong underlying signal.
In our case, the hypothesis of multiple-changes of the diversification rates appears to be most consistent with the results recovered by different methods to infer divergence rates.
Phylogenetic relationships were inferred using four different methods of analysis: neighbor joining (NJ) [ 25], maximum parsimony (MP), maximum likelihood (ML), and Bayesian analysis.
We show that no two methods produce the same results and most current methods of inferring genome phylogenies produce results that are significantly different to other methods.
Hotel Modern experimented with different methods of storytelling.
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Different methods of planning work for different people.
Different motives inevitably require different methods of expression".
Experiment with different methods of play.
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