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Habier et al. [ 4] compared the decline in accuracy over generations for different methods of breeding value estimation and found that the Bayesian model averaging method Bayes-B of [ 1] outperformed fixed regression least squares and a model equivalent to genomic BLUP, i.e., the BLUP animal model using marker-based relationships.
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Two hypotheses were tested in this experiment: (1) using genomic relationships derived from SNP marker genotypes could be an efficient approach to increase the reliability of breeding value predictions of forest trees, and (2) two different methods of estimating realized genomic relationships from marker genotypes yield equivalent accuracy of breeding value predictions.
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