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Differences in the groupings of pathogens between studies (e.g. Gram-negative enteric bacilli ± P. aeruginosa) may have led to underestimations in the prevalence of some pathogens, such as P. aeruginosa.
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There was a difference in the groupings for the 1A trees when compared to the P1 and other capsid-coding gene regions where three non-African A isolates clustered with the non-African O viruses (for all phylogenetic methodologies).
Various explanations have been given for these conflicting results, including small numbers of patients comprising the study population, differences in patient selection criteria and differences in the age groupings used in the analyses.
As a team, we examined the differences and similarities in the groupings and discussed strengths and weaknesses of the different categorizations.
The species contributing to the differences in diversity and the groupings in the ordination plot are shown in Table 2.
We report a higher difference of QALYs than the original Australian study, but have confirmed the direction of effect with our increased difference possibly due to differences in the underlying populations and groupings within the two studies.
Demographic variables (length of career and role in coastal issue) failed to account for the differences in groupings and preferences in either region, except for the variable 'favoring information source' in the Puget Sound group.
This represents a significant difference from the groupings performed in our study and could explain the variation in results.
Additionally, these students also accurately compared phylogenetic trees by identifying patterns of similarities and differences in monophyletic groupings across representations (clade comparison).
Only minor differences in cluster groupings between analyses were observed where S. agnetis and S. hyicus formed a clade with S. chromogenes as the sister taxon in Additional file 7: Figure S5, while the alternate (non-clock BEST) analysis estimated S. agnetis and S. chromogenes to form a clade, sister to S. hyicus (data not shown).
These differences in groupings might be explained by the different classes of exported protein that SOLCAD and PfSBP1CAD represent.
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