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The mature sequences of miRNA genes within families showed ≥85% sequence identity in most cases (i.e., the number of nucleotide differences between the sequences was ≤3), whereas the sequences between different gene families were mostly unalignable.
The results compare the differences between the sequences with and without tags.
The main differences between the sequences are located in the V2 loops, which are packed closer to the core of gp120 and the CD4 binding site in SHIV-1157ipd3N4, than in SHIV-1157ipEL-p SHIV-1157ipEL-p SHIV-1157ipEL-p
These two locations do not correlate to a known boundary of the X chromosomal evolutionary strata, and the compositional differences between the sequences on either side of these boundaries might not be a result of a different evolutionary origin.
It is indeed remarkable that such ability was not recovered at least in part even in mutant #9, since 30 residues were restored back to those present in synaptotagmin-1 in this mutant, and these residues involve the major obvious differences between the sequences of the synaptotagmins-7 and -1 C2B domains.
Given the major differences between the sequences of the P. berghei and P. falciparum CSP genes (Figure 1), we predicted that the immune responses induced by immunisation with irradiated sporozoites of the wild type P. berghei will be specific to the P. berghei CSP.
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Second, another experiment was executed to observe the differences between the sequence alignments with different version of BLASTP.
The conversation quickly focused on the differences between the sequence terms and the limiting value, and the class pointed out that these values were getting progressively smaller as the sequence continued.
Considering the known intra-isolate variability of RNA viruses, and that sequences were determined from different plant parts collected at different times for the MinION, Illumina and Sanger sequencing approaches, this "maximum error rate" is remarkably low as some of the identified differences likely reflect actual differences between the sequenced viral populations and not sequencing errors.
But there are four key differences between the sequence in dogs and wolves.
The differences between the sequence distributions also became apparent when the average number of sequences showing similarities to each section of the genome was compared.
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