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We calculated the distribution of this background error rate in terms of absolute beta value difference between the sequencing derived beta value and the array derived for all high-quality probes.
In each sample, putative SNPs were filtered based on the following criteria: (1) a Q20 quality cutoff; (2) at least five reads; (3) a p-value >0.01 (that means no significant difference between the sequencing quality of the two alleles in a heterozygous genotype); (4) a 5 bp distance from each other; and (5) 1/3 ~ 3 variation between quality score of two bases in heterozygous sites.
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Note that the difference between the sequences ({z_{n}}) and ({w_{n}}) only lies in the first terms, so that (w_{n}xrightarrow{d} zeta) as (nrightarrowinfty).
However, there are some difference between the sequences of HWTX-XI and other Kunitz type molecules (See below).
Furthermore, there was only one nt difference between the sequence from the patient and the wild boar meat over the 1,980 nt of the entire ORF2 giving a nucleotide sequence identity of 99.95%.
There was no significant difference between the sequences.
There was very little difference between the sequence logos derived from each of the Tritryps [Additional file 1] and little difference between the sequence logos of the two conventional classes of CCCH motifs.
The average amino acid difference between the sequences from Ethiopia and those from Murinae-associated hantaviruses was 27.0 ± 4.0%.
The average amino acid difference between the sequence from the white-footed mouse and that from Mobala virus was 8.1 ± 2.6%.
The error of a template-based model comes from template selection and sequence-template alignment, in addition to the structure difference between the sequence and template.
This difference was highly significant, also when correcting for small difference between the sequences at pre-test, t(14) = 5.749, p<0.0001.
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CEO of Professional Science Editing for Scientists @ prosciediting.com