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For a second alignment, comprising bat orthologues, the MAPP score of each amino acid variant was derived, together with the score of all other variants at the same site in the alignment that differed from the ancestral sequence by an equal or fewer number of nucleotide substitutions.
Common haplotypes defined using 1000 Genomes data differed from the ancestral state at 27−48 positions.
At no time were any bacteria observed that differed from the ancestral marker profile; therefore, it is unlikely that there was any external contamination.
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We therefore tested the function of V370A in vitro and found that the 370A allele does differ from the ancestral 370V allele in that it results in enhanced NF-κB activation (Figure 3).
The mt genome arrangements of both pseudoscorpions differ from the ancestral chelicerate genome arrangement.
The mitochondrial gene arrangements of both pseudoscorpions differ from the ancestral chelicerate gene arrangement.
Yet, bugs colonizing the introduced tree differ from the ancestral bugs in a variety of morphological and physiological traits.
None of the gene boundaries or inversions of genes onto the opposite strand that differ from the ancestral arrangement are shared between these two species (see Figure 1).
The arrangement of the hypothetical ancestor of arthropods is conserved in the horseshoe crab Limulus polyphemus [ 12], whereas most insect genomes differ from the ancestral state by the location of one tRNA [ 7].
Many researchers stress that adaptive behavior should not always be anticipated when current environments differ from the ancestral conditions under which our physiological and cognitive mechanisms of fertility regulation evolved (Irons 1998).
Compared with the genomes examined in our study, the only two IR-containing genomes currently available for the Ulvophyceae also differ from the ancestral partitioning pattern but show more extensive gene transfers from the LSC to the SSC region (Pombert et al. 2005, 2006).
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