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Venn diagram comparison of these three datasets showed that 164 BR genes were shared with the polysaccharide regulons, donated as the "biomass shared set" (BSS), but another 88 genes were not shared and comprised the "biomass unique set" (BUS).
Genes identified herein were upregulated (> 1.5 fold BH adjusted P < 0.01) as measured using either platform (Illumina and Affymetrix were combined) and duplicates were removed before Venn diagram comparison to previously known upregulated genes using the bioinformatics tool, VENNY [ 31].
A Venn diagram comparison of the remaining three annotations showed a moderate overlap, with only 34 common genes out of the total of 292 genes annotated by these three databases (Fig. 3b).
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Using GAD disease gene sets, Venn diagram comparisons among related disorders shows modest gene sharing.
Pathway Venn Diagram comparisons were performed by placing individual GAD primary gene sets into WebGestalt [ 15] http://bioinfo.vanderbilt.edu/webgestalt/ to identify KEGG pathways, then placing the resulting pathway names into Venny.
The vortex phase diagram, in comparison with the optimally doped compound, presents a narrow collective creep regime.
The oxygen-terminated edges occupy the largest regions in the phase stability diagram in comparison with hydrogen-oxygen-terminated edges, which correspond to carboxyl and alcohol functional groups.
Figure 6 shows Venn diagram depicting comparison of genes found (and then matched in HomoloGene) in four organisms.
Additional file 7: Genome diagram for comparison of significant iHS, R sb and change of autozygosity (Δ F L ) values.
The ellipse from the diabetic patients with retinopathy is displaced to the left in the diagram, in comparison with the ellipses from diabetic patients without retinopathy, and from controls owing to their lower contrast sensitivity peaks.
A Venn diagram of comparisons 1 3 (Fig. 3) showed that the pattern of host gene expression in partial resistance response became increasingly complex over the time course, with 66, 174, and 706 genes differentially expressed at 1, 2, and 7 dpi, respectively.
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