The dataset of 1044 hybridizations using 522 different samples covers numerous developmental stages, biotic and abiotic stresses and mutants.
The dataset included 1044 hybridizations based on 522 different samples covering numerous developmental stages, biotic and abiotic stresses and mutants.
Analysis of 136 Affymetrix transcriptome datasets comprising of 373 genome microarrays from studies in rice that encompass tissue, developmental, abiotic, biotic and hormonal transcriptome datasets identified 151 genes whose expression was considered relatively stable under all conditions.
The UPSC-Leaf dataset is a collection of 642 microarrays from 22 experiments profiling leaves in a range of developmental stages, biotic and abiotic stress treatments, and transgenic lines (see Methods for details), the results of which are visualised in Figure 4A. Figure 4A shows the resulting hierarchical co-expression tree generated by the analysis.
Given the critical roles played by NAC TFs in plants, we have identified a NAC TF family in the potato genome, provided nomenclature, performed phylogenetic analysis, mapped genes onto the 12 potato chromosomes, identified membrane-bound proteins and carried out expression analysis under various developmental stages, biotic and abiotic stresses and hormone treatments.
Ethylene is a gaseous plant hormone that regulates many developmental events and biotic and abiotic stress responses of plants.
These ESTs were derived from cDNA libraries cloned from different tissues and developmental stages during biotic and abiotic stress [ 6- 8].
Current studies have shown that the bZIP proteins regulate numerous growth and developmental processes and biotic and abiotic stress responses.
To maximize sequence diversity, we pooled RNA from 10 samples of different tissues, various developmental stages, and biotic- or abiotic-stressed plants.
NAC transcription factors are a plant-specific family, which have been implicated in developmental responses to biotic and abiotic stress [ 27].
