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Nevertheless, algorithms and software developed for alignment and variant identification of human NGS data provide an excellent resource for translating NGS data of other non-human organisms, such as cattle, into genetic variants for application in genome wide association studies and genomic selection programmes.
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The new sequence alignment programs that have been developed for the alignment of sequence reads against reference genome sequences for resequencing projects (see above) do not appear to be suitable for comparative genomics approaches.
As demonstrated in [ 18, 19], techniques that were originally developed for sequence alignment may also have potentials to improve network alignment methods.
As 3 wt.% of Ni/CoO coated MWCNT is dispersed in polystyrene matrix, a viscous liquid with solvent is developed for magnetic alignment.
Recently, genetic algorithms, which can search very effectively through complex spaces with huge numbers of local optima, have been successfully developed for highway alignment optimization.
Another early approach was to use BLAT [19], a tool developed for the alignment of longer EST sequence.
In the recent decades, computer navigation-assisted total knee arthroplasty has been developed for precise alignment; hip resurfacing arthroplasty has been introduced to preserve bone.
Bowtie 2, which was developed for gapped alignment, was included in our comparison to illustrate the consequences of selecting an inappropriate aligner.
The imaging system is built on a customised trinocular (three channel) rigid endoscope (Intuitive Surgical, Inc., Sunnyvale, USA) with computer vision techniques developed for image alignment.
The positioning stability error budget is developed for the alignment-sensitive components to provide connections between mechanical designs and performances of the support systems when they are subjected to multiple input sources that can cause structural vibration and drift.
Consequently, a wide range of methods have been developed for distributed sequence alignment.
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