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For example, phosphorylation sites are largely expected to occur on solvent-accessible portions of proteins, particularly loops, so an additional weight could be added to motifs that are expected to occur in such regions, as determined by existing secondary structure prediction [56] or homology modeling algorithms [57].
Specific functionality includes: (i) selection of arbitrary subnetworks using a graphical editor provided by Cytoscape; and (ii) defining special interest networks based on network motifs, cycles, modules, shortest paths determined by existing Cytoscape plug-ins, such as SubgraphCreator.
We included 89 residences from two studies conducted in northern and central California in our analyses that met the criterion of having a minimum of 25% of the land area within 500 m of the residence in agricultural fields as determined by existing land use maps.
For cancers with a range of developed alternative therapies, such as stomach and lung cancers, whether to perform surgical treatment is frequently determined by existing comorbidities, and patients with high CCI scores are treated in a manner as noninvasive as possible [ 8].
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And some philosophers of religion have been content with a conception of human freedom that is consistent with causal determinism, the view that all events and choices are determined by previously existing causes.
A Joel Abramson, a Manhattan real estate lawyer, said that once an apartment becomes a free-market apartment, "it is a creature of the marketplace" and all rights and obligations are determined by the existing lease and future negotiations between the parties.
The accuracy of the classification can be determined by many existing evaluation methods such as error-rate, recall-precision, any label and label-weight etc.
In addition to providing the atomic coordinates, the predicted structures have further clarified some ambiguities that could not been uniquely determined by the existing experimental data, such as the directionality of the subunit arrangement in the heteropentamers.
The final failure was determined by an existing crack, which had propagated up to a considerable part of the cross section of one of the main tubular elements, which constituted the jib frame.
The state of a cell, which can be either solid material or void, is determined by mapping existing voids through plastic convection and creating new damage through the cellular automaton.
The same basic structure appears in Lang and Manove's([2011]) test of a model in which young individuals' educational attainment decisions are determined by their existing cognitive ability and by one's race (owing to race-based differences in the way the education signal is perceived by employers).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com