Sentence examples for determined abundance from inspiring English sources

We also determined abundance as rpkm using Cufflinks v2.1.1 (with −N, −u, and −b options) (Trapnell et al. 2012) (Supporting Information, Table S1).

Comparing the experimentally determined abundance of individual proteins, highly expressed proteins were found to be consistently smaller than lowly expressed proteins, in accordance with the biosynthetic cost minimization hypothesis.

Since we had shown that all genes in the anthocyanin branch of the pathway are upregulated in tissue infected with SG200, but not in tissue infected with SG200Δtin2, we determined abundance of transcripts encoding key enzymes in the general and lignin-specific branches of the phenylpropanoid pathway by qPCR in leaves infected with strains SG200 and SG200Δtin2.

Such values should be considered in the interpretation of amplicon-sequencing data given that, relative to other taxa present, they influence the determined abundance (35).

Yang determined abundances and modes of occurrence of trace elements in the Late Permian coals in the Puan Coalfield, Guizhou, China, and found that the silicate-associated fraction of Se was about 3.81% of the total[38].

For the frugivorous species, Trogon surrucura, Carpornis cucullatus and Triclaria malachitacea, patch size was the main factor determining abundance.

Here, we examined the factors determining abundance and species composition of Tetragnatha spiders in agricultural ditches around rice paddy fields.

Thus, the primacy of spatial vs. temporal factors in determining abundance, as well as the extent to which spatial patterns change over time, remains uncertain.

In order to quantitatively determine abundance of ribosomal proteins in the high salt treated immature 30S subunits, a TMT-based (tandem mass tags) (Thompson et al., 2003) quantitative mass spectrometry (QMS) was applied, as previously described (Guo et al., 2013).

In particular, the response of woodpeckers to local beetle epidemics depends on how the structural and spatial properties of the surrounding patches influence reproduction, determine abundance and facilitate predator dispersal.

The cRAP protein database, which lists common contaminants, was used to determine abundance thresholds for including predicted proteins.