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The purpose of alignment is to best determine sequence homology.
The deduced protein sequences were aligned with 11 published Class I α-1,2-mannosidases to determine sequence relationships.
Using A to replace "1" and B to replace "0" in the FFPC series, we can determine sequence of A and B layers in the structure.
Applying essential concepts to determine sequence boundaries and comparing gamma ray and sonic logs as well as paleolog data with Arabian Plate sequences, we interpret depositional sequences and sea-level changes during deposition of the Dariyan Formation.
Alternatively, single-stranded conformation polymorphism (SSCP), a simple and rapid method to determine sequence variation in a large number of samples without expensive direct sequencing, was proposed to use for genotyping and mapping genetic diversity in crop plants (Kuhn et al., [2008]).
We aligned therefore the N-terminal third of the passenger domain of EspP with Hap to determine sequence conservation within this region using the AlignX tool in Vector NTI software package (Invitrogen Inc., Karlsruhe, Germany) (data not shown).
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According to emotional and behavioral state transition probabilities, artificial emotions determine sequences of behaviors for long-term action planning.
In silico analysis was performed to determine sequences displaying antigenic properties.
To determine sequence-specific RNA binding preferences of Msi proteins, we used 'RNA Bind-n-Seq' (RBNS) to obtain quantitative and unbiased measurement of the spectrum of RNA motifs bound by recombinant MSI1 protein in vitro (Lambert et al., 2014).
2D H{N} HSQC, 3D HNCA, 3D HN CA CO, 3D HNCO, 3D HNCACB, and 3D CBCA CO NH peak lists for NP4 were used as input to the PINE server and, employing the PINE-SPARKY extension, were used to determine sequence-specific backbone resonance assignments.
Subcloning, followed by sequencing, must be used in these circumstances to determine sequences of minority strains.
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