Sentence examples for detected variant from inspiring English sources

Then, the nucleotides were replaced on the detected variant position in the reference genome with the alternative nucleotides if the position (1) had coverage of least 20% of the average coverage by reads in each library, (2) covered by at most twice of the average coverage, and (3) had 30 or higher mutation detection quality (QUAL) reported by GATK.

Finally, we observed recognition of some variants despite the fact that at that time, the variant sequences were not yet observed and responses to the founder epitopes and other major variants were not detected (variant ET9 of Vpr EI9 at 1501 DPS and A2DY9 of Env AY9 at 190 DPS; Figures 7A and 8D).

Determination of the parental origin of the detected variant(s) should be advised.

To confirm the germline origin of the detected variant we analyzed the DNA from oral epithelium cells.

Interestingly the detected variant allele frequencies were strikingly similar between multiple tumour samples from the same patient.

Scrutiny of the genotypic phenotypic relationship of each detected variant assessed that the majority of events are very likely pathogenic.

The primers detected variants 1 and 3 at low levels in the embryos at stage 16 and in the eyeball tissue.

Two versions of plasmids encoding the 12 Env CE were generated, differing by 0 5 AA per CE to maximize the inclusion of commonly detected variants.

ExAC is a helpful tool to avoid cost-/time-intensive screenings and misinterpretations of detected variants.

However, previous studies of the OPV have detected variants lacking particular attenuating mutations in vaccine lots (Kew et al. 2005).

A series of putative interaction sites coincide with detected variants.