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We used Picard (v0.92) to designate read groups by donor and cell type.
Wildcard matching: originally RMAP could use base-call quality scores through a user-specified cutoff, which designated read positions as either high- or low-quality.
Here, we designate read-pairs in divergent orientation as Class 1 structural events and read-pairs in parallel orientation as Class 2 structural events.
The collections are non-circulating and are used only in designated reading rooms.
His secretive, centralized command of national security policy, which included personal visits to the Central Intelligence Agency, where a designated reading room was set aside for him to review classified intelligence matters, became a signature of the Bush years.
A way to approach this question is through electronic literature; and, more specifically, by designating reading – and the teaching of reading – electronic literature as sites of praxis, where we might observe literacy at-work in its "default settings".
3. Have a designated "reading time" Finding the time to read gets easier if it's scheduled, instead of simply allocating reading to whatever downtime you find available.
A precipitating dye (Seramun Green, Seramun, Heidesee, Germany) was then added, and the hybridisation pattern was analysed using a designated reading device and software (ArrayMate by Alere Technologies GmbH).
It is no coincidence that this much ignored and hardly understood event in the life of Jesus - his transfiguration - became a designated Gospel reading only in the 1980 Prayer Book revision.
Only "a handful" of hard-copy papers are available to a limited number of people and they can only be accessed in designated Whitehall reading rooms or a permanent secretary's office – the most senior official in a department.
The marketing is so blatant, finally, that the notoriously acerbic Michiko Kakutani – in a largely positive review in the New York Times – picked up on it: "With its sunny cover and May 31 publication date, the book looks like designated vacation reading – but it's just too deftly and thoughtfully written to be relegated merely to the beach".
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com