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To design a workflow process that is efficient, meaningful, and understandable it is important to properly consider how to compose the activities it will consist of.
To make the system scalable and easy-to-extend, we design a Workflow as a Service (WFaaS) a rchitecture with independent services.
Currently, there is a strong dependency in the individual skills of scientists to connect tasks and design a workflow.
This makes it especially useful in terms of distributing the workload of carrying out a curation task: users with a technical background may entirely design a workflow, which they can then share with, for example, biologists for them to run the workflow and provide annotations using their domain expertise.
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Overall, we designed a workflow for the unsupervised analysis of localization patterns, that we validated on simulated data with varying degrees of both pattern strength and expression heterogeneity.
In the present study, we have designed a workflow by integrating various ligand-based and structure-based approaches to discover new agents active against DNMT1.
An important issue that must be addressed while designing a workflow is to decide what tasks are needed for the workflow to complete — we refer to this set of tasks as the completion set.
Finally, since designing a workflow is a trial and error procedure, WR can also be coupled to redesign tools like [44]. 1 Retrospective provenance describes the steps taken during execution, while prospective provenance describes the workflow structure [1, 31].
We have recently designed a workflow within the ChemicalToolBoX to generate a library of compounds containing around 70 million unique commercially available small molecules, i.e. the purchasable space [3].
At its core, Parabola is a more visually oriented way of designing a workflow where users can piece together a complex work problem in a kind of flowchart piece by piece.
To reduce the likelihood of non-target hybridization, we designed a workflow for finding the best probes of input sequences based on uniqueness of probe sequence and probe-to-target duplex stability.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com