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Our proposal differs from the existing ontology-based approaches for the description of experiment protocols by suggesting a meta-language for the description of experiment actions and their properties.
At the same day of sampling (see description of experiment I) uncovered endo-agar plates were placed in the stable.
EXACT provides a model for the description of experiment actions and it can be used for the fully formalized representation of protocols.
At subjective dawn on the 6th day of the experiment (see Supplementary Material for a description of experiment), the grown Arabidopsis seedlings were given a 20 min red light pulse to induce CAB2 expression.
This careless/vague description of experiment protocols was perhaps viable when molecular biology focused on qualitative experiments: the correct result being indicated by a band on a gel in the correct place, a colony growing, etc.
However, with the ever increasing importance of quantitative methods such as microarrays (where numerical values have to be interpreted as biological observations and tens of thousands of experiments are executed simultaneously) the precise and unambiguous description of experiment protocols is essential.
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He describes his work as an endless quest "to make the note come out a little different", and the most gratifying section of the book is his description of experimenting with an Admiralty sonics expert called Roger Mayer.
This paper complements other efforts to provide a full description of experiments and open science resources generated from the Tara Oceans project, further extending their value for the study of the world's planktonic ecosystems.
Figure 6 Description of experiments, processes, and tasks.
The detailed description of experiments will be provided later.
In addition it will provide a medium for the description of experiments in curriculum, teaching method, and administration.
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