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The methodology mentioned in the section 'Case description' (Figure 1) was applied to Karafarin Bank data.

Description: Figure S1, histogram of the distribution of the hydrodynamic diameter of PHMB-stabilized silver nanoparticles determined by dynamic light scattering.

Our combined analysis of microarray gene expression and term enrichment indicated that uspE and gadX were both up-regulated in many samples (chips) where 'biofilm' was mentioned in the sample title and/or description (Figure 3B C).

We do notice, nevertheless, that expression of CUG repeat RNA in Drosophila embryos does not mimic molecular alterations described for mbl mutants [11], but we found inconsistencies in such description (Figure S2).

Description: Figure S3 shows patterns of allele frequencies for Holstein-Friesian versus Jersey animals.

Description: Figure S2 shows the distribution of allele frequencies of variants with on average a moderately low minor allele frequency (MAF), very low MAF or extremely low MAF in real data and imputed data for Jersey animals.

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The argument maintains that intentional description figures centrally in many core areas of cognitive science, such as perceptual psychology and linguistics.

The continuing upward trend of the curve of new species descriptions (Figure 2) clearly demonstrates that we have a long way to go yet regarding new species descriptions, even in a relatively well known group such as fishes.

This has in principle been achieved by projects such as Cortona3D (web browser plug-in; http://www.cortona3d.com), which can render 3D objects reconstructed from MRI-based anatomical descriptions (Figure S3).

EQ phenotypes are attached to character states and are serialized using the PhenoXML schema (http://www.fruitfly.org/~cjm/obd/formats.html), a standard developed by the OBO community for representing Entity-Quality phenotype descriptions (Figure 1B).

We have added a more detailed description to Figure 1 and Figure 1 figure supplement 1 to clarify the ATP concentrations we used for each figure.

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