Sentence examples for described pathways for from inspiring English sources
In all case-studies, the algorithms were able to find already described pathways for the production of the target compounds, but also alternative pathways that can represent novel ME solutions after further evaluation.
The described pathways for acetone degradation by aerobic or nitrate-reducing bacteria require at least 3 ATP equivalents to obtain this intermediate.
ApoA-I is the most abundant protein in HDL and the HDL-mediated ApoA-I pathway and passive diffusion are the only well described pathways for cholesterol efflux [ 17– 17].
Any restrictions to use by non-academics: none EA developed and tested the complete PathwayVoyager software and performed the described pathway reconstruction for Lactobacillus acidophilus NCFM.
In silico, this can be achieved by coupling the software tools developed for describing pathways to tools developed for study of protein dynamics.
Consequently, considerable information is needed for describing pathways and characterizing the function and structure of the pathways.
The Beacon Pathway Editor consists of a tool designed to draw pathways encoded in the Systems Biology Graphical Notation Activity Flow language that is a standard for describing pathways in terms of perturbations, influences, activities, logical operators, and phenotypes [ 41].
SBGN PD notation is precise notation for describing pathways, on the other hand the binary-relation based conventional notation used by molecular biologists in the current literature, is intuitively understandable.
The biological pathway information describing pathway types, regulations for genes, and/or experiments was retrieved from HPRD, KEGG [ 26] and CGAP [ 27].
BioPAX is a community standard ontology for describing pathway and protein interaction data, suitable for qualitatively representing the current knowledge of biological systems.
Three previously described metabolic pathways for P. denitrificans were selected and translated into balanced chemical equations using a thermodynamic model.
