Sentence examples for descent analysis from inspiring English sources

Some also used identity by descent analysis (IBD).

Pair-wise IBD (identity by descent) analysis was undertaken using PLINK version 1.0.7 [ 24] on the basis of a subset of 27402 informative autosomal SNPs with a minor allele frequency >5%.

To identify related individuals' identity by descent analysis was carried out using a set of high quality (missingness <0.002, minor allele frequency >0.1) and linkage disequilibrium pruned (r<0.2) SNPs.

Identity-by-descent analysis was performed in Plink statistical software.

Forty-two duplicate samples were removed after identity-by-descent analysis.

Furthermore, identity-by-descent analysis was performed using the data generated from the Bovine SNP50 BeadChip to select only the individuals with an identity score of less than 0.25 using PLINK version 1.07 [ 26].

In addition, ethnic composition of the sample was estimated by Identity-By-State Analysis, using Principal Component Analysis, and cryptic familial relationships were identified through Identity-By-Descent analysis].

Pairwise IBD (identical-by-descent) analysis was used to investigate the first-degree (PO: parent-offspring) and second-degree relationships among the wild and cultivated Georgian individuals by PLINK [ 31].

Samples required >95% genotyping efficiency (failed Spanish n=50, Filipino n=50) and PI-Hat scores >0.2 on identity-by-descent analysis using ancestry informative markers (AIMs) in order to exclude cryptic relatedness and duplicate samples (failed Spanish n=27, Filipino n=3).

The CD133 and CD10 expressions were split into high- and low-level groups using recursive descent partition analysis, as described by Hoffmann et al. [39].

Our study population did not include enough persons of Hispanic descent for analysis.