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All centrality measures are derived from the adjacency matrix, so they constitute different mathematical computations using the same underlying data.
Whereas the predictors in MRF-Deng are derived from the adjacency matrix that represents the network, they are derived from a similarity kernel in KLR.
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In the latter scheme, diffusion wavelets are based on construction of an orthonormal basis for functions supported on a graph and obtaining a custom-designed basis by analyzing eigenvectors of a diffusion matrix derived from the graph adjacency matrix.
In the kernel canonical correlation analysis (kCCA) approach (Yamanishi et al., 2004), the goal is to identify feature f1 from the input kernel and feature f2 from the diffusion kernel derived from the partial adjacency matrix so that the two features have the highest correlation under some smoothness requirements.
The Gram matrix K associated to the one-step random walk kernel can be derived from the symmetric adjacency matrix W of the functional interaction undirected graph G: (20) K = (a − 1 ) I + D − 1 2 W D − 1 2 where I is the identity matrix, D is a diagonal matrix with elements d ii = ∑ j w ij, and a is a value larger than 1.
Then, a global layout is computed for the diagrams of the selected residues starting with the determination of the optimal global target sequence (circular order of amino acids around the ligand) derived from the original 3D residue adjacencies.
In this context, however, we prefer the term "conductance matrix" to avoid confusion, as adjacency between nodes in the graph derived from the grid does not necessarily imply spatial adjacency between the cells represented by the nodes.
The vertex set for each of the graph components is derived from the sequence nucleotides, whereas the edge set encodes both the nucleotide sequence adjacency information and the pairwise binding status.
Calculations derived from the C.B.O.
(The titles were derived from the scores).
Modern Korean derived from the ancient Sillan.
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