By visually inspecting depth-of-coverage plots and representations of spliced reads in a genome browser, it is easy to see that a majority of genes are tractable and the expressed splice forms can be determined (Fig. 2A).
Furthermore, while all use BLAST-based statistical distance metrics for the clustering, the implementation, sensitivity, the notion of the distance metrics and consequently the depth of the hierarchical representations are different for each of the underlying algorithm and resource (Liu and Rost, 2003).
This type of depth representation basically corresponds to binocular disparity (also known as horizontal parallax), including again necessary modifications, such as scaling, shifting, and quantizing.
Fortunately, several characteristics of the new types of sequencing data, specifically increased depth of coverage and low representation biases in the sequencing libraries lend themselves well for finishing analysis.
The relatively large number of identified contigs can be explained by the targeted 3′ nature of the 454 transcript sequence data that enables a high read depth representation of the 3′ ends of genes.
That's unfortunate, because the readers who respond are asking for a different kind of representation, a greater depth that reflects them as human beings, not teenagers looking for a heartthrob of the month to pin up to their bedroom walls.
More importantly, the show will offer an in-depth look into Wiley's examination of representation, status, and power.
The presence and definition of boundary conditions, types of representation, languages used and depth of context annotation vary widely across repositories.
Since depth of sequencing and the relative proportion of representation of the alternate allele play a key role in genotype calling [ 28], we delineated genotype discordances among technical replicates at varying depths of sequencing.
"Perhaps it's just as well that Dargis doesn't propose any specific measure for the DuVernay test; rather than producing a simply binary yes/no, it can serve similarly as a way to begin discussing the diversity, representation, and depth of the stories of minority characters in the films we make and watch".
