Sentence examples for deposited model from inspiring English sources
In contrast, in the deposited model refined against the original XFEL data (Hattne et al., 2014; PDB ID: 4OW3), weak density features in this region were interpreted as water molecules.
Unfortunately, there is vanishingly little agreement between their deposited map EMDB-58900) and their deposited model (PDB 3j6c).
> -wrap-foot> In the deposited model, the alternate side-chain and backbone conformations for Val168 have a relatively large Cβ displacement (0.66 Å).
The reason that this is consistent with the deposited model (3j6j.PDB) is simply that the subunits are helically arranged and do not pack to form a solid core.
It is designed for interactive use, so that end users can execute desired operations directly on deposited models.
The aim of the present study is to utilize fractographic methods employing scanning electron microscope (SEM) images to investigate the effects of build direction and orientation on the mechanical response and failure mechanism for Acrylonitrile Butadiene Styrene (ABS) specimens fabricated by fused deposited modeling (FDM).
Hreed was developed based on an object-oriented data model for storing standardized reactions, compounds and gene annotation information from deposited models.
Actually in the last CASP8 and CASP9 experiments the top performing model quality estimators were those using clustering/consensus methods on the ensemble of deposited models.
Agreements with several journals make it mandatory for authors to deposit models mentioned in their manuscripts in Biomodels.net, where they are checked for syntactic correctness.
The homology models have been deposited at Model Archive (doi 10.5452/ma-asp8e) [ 54].
The A. vinelandii FeSII model (deposited at Protein Model DataBase at identification number PM0075978) exhibited high stereochemical quality (97% of residues in the allowed regions of Ramachandran plot) and a high probability to represent a native-like conformation (Dope-score -3.7493 and ProSa Z-score -5.06).
