Sentence examples for depending on transcript from inspiring English sources

We also present evidence that many high-quality potential miRNA binding sites become located in different mRNA regions, or are gained or lost altogether, depending on transcript isoform.

2) Both alleles were predicted depending on transcript.

The number of amplification cycles and annealing temperatures were optimized for each target cDNA depending on transcript abundance and melting temperatures of primer/target duplexes, respectively.

SNP rs2043211 encodes a missense protein variation (C10X or F52I depending on transcript, [ 33]) with the minor allele increasing the risk of gout.

For example, the sequencing coverage among different transcripts can range over five orders of magnitude, depending on transcript abundance and sequencing depth.

However, the dynamic range of microarray signals depends on transcript abundance [ 21], making this plasticity metric dependent on abundance.

There are also many sources of evidence for curation that do not depend on transcript data.

Further, the number of tags produced for a given transcript by 454 will depend on transcript length and shearing efficiency as well as transcript abundance.

This suggests either that ecotype-specific transcripts are shorter or that the power to identify orthologs in the other ecotype depends on transcript length.

Piranha deals with three key challenges on computational site identification: (1) presence of noise and false positives, (2) resultant reads depend on transcript abundance, and (3) it is important to integrate different sources of information to improve peak calling.

As MMO depends on transcript predictions and abundance estimates, it needs to be run multiple times in conjunction with solving the MITIE core optimization problem in an expectation-maximization-like manner.