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But we do not combine P(D|A,π) with P A,π) since all aforementioned data sources (probabilities P i)) depend on the sequence S as well.
Several recent studies demonstrated that the degradation of intended transcripts by siRNA (so-called "on-targets") and unintended effects arising from inadvertent targets (so-called "off-targets") depend on the sequence of the RNAi reagent and have to be computationally analyzed [ 4, 5].
Most recently, promoter proximal σ-dependent pausing by bacterial RNAP was shown to, in part, depend on the sequence downstream of the elements recognized by σ-factor: the sequence corresponding to the RNA DNA hybrid of the paused complex (Perdue and Roberts, 2010).
A matched filter would also depend on the sequence design, i.e., on the statistical dependencies of the individual x k.
On the other hand, Suh's theorem 7 states, "the information contents of coupled and decoupled designs depend on the sequence by which the DPs are changed to satisfy the given set of FRs".
The experiments performed on model peptides demonstrated that response factors in HPLC analysis of labeled peptides does not depend on the sequence and tryptic hydrolysis of obtained conjugates is completed in minutes producing labeled standards useful in quantitative proteomics.
Similar(20)
Both DNA stains show the same structures, but the intensity of signal depends on the sequence bias of the DNA in the organelle and the stain used.
The results, however, depend on the sequences in target databases and on search algorithms.
Importantly, both RNA and library preparation choices depend on the sequencing platform used, as well as on the experimental objective.
Moreover, the performances of three popular multi-sample calling tools, SAMtools, GATK and GlfMultiples, also depend on the sequencing depth.
This step is important, as the interpretation of one-letter sequences will vary depending on the sequence type.
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CEO of Professional Science Editing for Scientists @ prosciediting.com