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The F-score on the Gavin dataset are listed in Table 4. "Gavin+AImed" denotes this data comprised Gavin PPI data and PPI data extracted from the literature using the AImed corpora training dataset.

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We denote this data set by Vicsek.

We denote this data set by H3N2.

We denote this data set by Klein.

We denote this data set by vertebra.

We denote this data set by eleg.

We denote this data set by netw-sc.  .

We choose ((N,d)= 50,16)) and we denote this data set by random.

(The authors of that paper retrieved the sequences from [169].) We denote this data set by HIV.

We define the weight of an edge as the inverse of the correlation.10 We denote this data set by genome.

We denote this data set by fract and distinguish between the two ways of defining distances between weights using the abbreviations 'r' for random, and 'l' for linear.

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