Sentence examples for deleted clusters from inspiring English sources

Then the cluster assignment phase is re-run for those sequences belonging to the deleted clusters.

In contrast, 26 deleted clusters were found to include exclusively irrelevant genes for growth on defined medium.

Concurrently, the status of any unclassifiable gene in the deleted clusters could be assigned as non-essential.

Nevertheless, the observed phenotypes are of high interest, as the results indicate gene functions in the deleted clusters that are not yet fully understood.

A possible reason for this observation could be the homologous functions encoded within the deleted clusters, incorporating one (cluster #21 and #51) or two (cluster #41) operons for ribosomal RNA (rrn).

For mutations on the parental copies of chromosomes 6 and 7 that are subclonally deleted, cluster B is completely lost, whereas the others remain unchanged.

The deleted cluster includes the gene cg0172 (panD), which could not be classified in our essentiality analysis, as unpublished deletion experiments were in disagreement with the literature.

In the next step, we deleted several clusters of non-essential as well as unclassifiable genes from the prophage-free strain and evaluated the growth phenotype of the truncated strains on CGXII medium.

Strains with successfully deleted gene clusters were grown on LB or CASO agar plates and colonies were suspended in 0.9% (w v 1) NaCl with 20% (v v 1) glycerol and stored at –80°C as a master cell bank (MCB).

Conclusively, at least one gene in each of the corresponding deleted gene clusters is of general relevance for the biological fitness of C. glutamicum and the addition of complex substrates cannot recover the growth phenotype of the WT.

By following the Chinese restaurant dogma, for which popular clusters tend to attract single elements, we calculate a distribution of cluster sizes and we delete the clusters whose size is below the 5th (or 10th) percentile.