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Return the data and preferences defining a background plot.
Defining a background model is a general approach in searching for over-representation of DNA words within a sequence set.
It is worth noting that 1.6% of random sites met the same criteria (three hot spots), defining a background level of false positivity.
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In order to test whether any obtained effects were specific to the grating locations or extended into non-stimulated visual cortex, we also defined a background ROI, consisting of voxels with a pRF on the background, non-overlapping with either of the grating locations (separately for V1, V2 and V3).
Since the turn-over time is of the order of a few hundreds of years, the re-analysis of such models may help define a background flow above which a flow perturbation could be described (equivalent of a climatic mean in oceanic studies).
A custom-programmed time-lapse used with Micro-Manager enabled the user to define a background region before starting the acquisition.
In a large cohort, this allows to define a background error distribution on each locus, above which true variants can be called.
We defined a background mutation as the total number of missense mutations in the non-pocket regions of all proteins (369 unique proteins, Additional file 1: Table S1).
We first defined a background dbSNP subset, which was read-covered in both tissue sequencing of the tumor and matched normal among dbSNP.
An alternative strategy is to use the distribution of the database to define a background distribution, based on the following assumptions: first, that there are two distinct populations, namely, a small number of closely matched and a large number of non-matched samples; and second, that the distances of the non-matched samples are normally distributed.
In this example, we choose to model the background emission together with the source emission, which in this case involves defining a complex background model consisting of multiple components.
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CEO of Professional Science Editing for Scientists @ prosciediting.com