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We defined the alignment time of each step as 0 s, and calculated mean values of a 0.2 s time window on the basis of the alignment of each step.
For monomorphemic words such as c laim and shape, we defined the alignment point as the timing corresponding to the beginning of their last phoneme.
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On the basis of these choices we define the alignment algorithm, which has been implemented in MP-Align.
Finally, the detection of peaks in the correlation sequence defines the alignment of slots and frame structures.
Then, this alignment was used to define the alignment of the corresponding nucleotide sequences to avoid frame-shifting indels as alignment artifacts [46].
(We define the alignment of the cell as the alignment of the ellipse that best fits the cell shape).
Here, we define the alignment of two graphs as an injective one-to-one mapping from a subset of vertices of one graph to vertices of the other graph, see Figure 1a.
The relocation of hypocentral parameters reflected more precise focal depths and helped to define the alignments of seismicity to the NW and the ENE to EW in the upper crust beneath the epicentral area, as shown in Fig. 6.
More generally, if there are k residues in T about which shifts/rotations are defined, the full alignment A is partitioned into k + 1 partial alignments: A (T 1, …, T i 1 ), A (T i 1, …, T i 2 ), …, A (T i k, …, T | T | ), where i 1 < i 2 < … < i k < | T |.
And, we also defined the candidate alignment regions (CARs) as a list of MRs that is close to each other.
One of the earliest network alignment algorithms, NetworkBlast (Sharan and Ideker, 2006) defines the network alignment graph by identifying sequence similar proteins from several species and carries out a search over this graph for dense clusters of interactions.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com