We define redundant subunits as the structures that share at least 95% sequence identity, using ASTRAL SCOP 1.75 [23].
Based on the SC to CPT when Shu mutations are combined with tel1 Δ in yeast and when rfs-1 is combined with atm-1 in the worm, it is possible that the Shu complex and Tel1/ ATM-1 define redundant pathways that mediate the loading of Rad51 at sites of CPT-induced replication fork stalls to promote HR-mediated repair or bypass.
Redundant feature: Two non-selected features say (f_i) and (f_j) are defined as redundant with respect to a given selected feature say (f_k, if, feature_feature_MI(f_i,f_k)=feature_feature_MI(f_j,f_k)).
Redundant stretches of DNA were removed from the database, where a stretch of DNA was defined as redundant if it differed from another piece of DNA by at most 2 nt over a window of 100 nt.
Such BDGs are defined as redundant BDGs.
In our study we defined as redundant a set of rules characterized by the same set of genes or a subset of it and with the same support.
ESTs were defined as redundant when they exhibited more than 95% identity over aligned regions and were assembled into a single contiguous sequence.
QTL identified as being potential duplicates of the same QTL (i.e. QTL identified in the same study within an identical marker interval by different methods) were defined as redundant reported QTL.
Liver fibrosis, defined by redundant deposition of extracellular matrix (ECM) and resultant loss of soft and liver function, is the result of wound-healing responses stimulated by various liver injury [ 1, 2].
We filtered out poorly defined and redundant TE consensus sequences showing no full-length copies (i.e. copies covering more than 95% of the consensus sequence) in the genome.
Determination of transposon insertion sites also enables users to select defined, non-redundant sets of mutants depending on individual needs and facilitates rapid identification of causal genes of the mutant phenotypes.
