For each of the five consensus trees, prior information on variety group designation (based on SSR or isozyme classification) was used to define assignment to one of the five groups – indica, aus/boro, basmati/sadri, japonica (tropical or temperate).
A peak assignment defines the assignment of a single peak p k : p k → r i or, in a simplified notation, k→ i.
A global assignment defines an assignment of all peaks p k → r i k for k=1,…, N P with i k ∈{1,…, N R } and i k ≠ i l ∀ k≠ l.
It included whether or not studies performed multidimensional geriatric assessment and assigned patients (defined as assignment to therapy and care team meetings for individualised goal setting).
Note, peaks are broad and poorly defined making assignment of the spectra difficult.
Paralleling a previous analysis, long-term treatment with delamanid was indicated as ≥6 months, defined by assignment to delamanid or placebo in Trial 204 and participation in Trial 208, and short-term treatment with delamanid was indicated as ≤2 months, defined by assignment to delamanid or placebo in Trial 204 and no participation in Trial 208 [ 6].
Classification accuracy was examined using logistic regression in which the dependent variable was defined by assignment (or not) to the top 5% risk group in terms of Year-2 charges (high consumer yes/no).
Clusters defined by assignment analyses of nuclear markers correspond well to the mtDNA topology; of the six inferred demes, G, N, P, and S correspond largely to main mitochondrial clades G, N, P, and S, and demes C1 and C2 together account for the mitochondrial clade C. Substructure in the mitochondrial clade C does not correspond to the genetic break between demes C1 and C2.
To encode this, multistate species can be defined with assignments depending on specific values of a state.
