Sentence examples for defined as reads from inspiring English sources

We also compared our lists to sets of genes highly expressed (defined as reads per kilobase of transcript per million mapped reads (RPKM) >10) in human tissues according to the RNA-seq Atlas, and found the genes from the most convergent H2 list were enriched in genes highly expressed in the hypothalamus (P = 0.029, Fisher's exact test; Supplementary Table 13).

Nevertheless, the average coverage of good reads (defined as reads that are (a) mapped with no more than 3 mismatches (see Methods), and (b) either in good pairs or single ends) from both platforms are almost identical at about 25×, as summarized in Table 1.

On the other hand, singletons were defined as reads that match other reads but neither do have sufficient coverage nor present conditions to assemble with them.

RPKM (defined as reads mapped per kilobase per million mapped reads) was calculated across genes and genotypes to standardize the variable genotype coverage and gene size.

For analysis we used only uniquely mapped reads, which were defined as reads having at least two additional mismatches in the second best hit compared to the best hit.

Spanning reads were defined as reads that lay across the breakpoint.

Readability is defined as reading easiness.

As a result of use of library and archival documents, defined as reading with handling in the context of general access, mechanical degradation (wear and tear) accumulates.

A number of reads that start at a distinct genomic position normalized to the previous position was defined as read stack and a transcriptional start site (TSS) was assumed at the 5′-position at each of these stacks.

Low quality reads were defined as those reads that had at least half of their quality scores below 30.

The reads with low quality scores are defined as the reads with greater than 10% of unknown bases (N) or greater than 50% of low quality bases which quality values are less than 5.