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We used the default significance levels to test if significant enrichment was reached with normalized p-values below 0.05 and with false discovery rates below 0.25.
The default significance threshold was p<0.05.
This includes the distance-to-model, DModX, criterion [29], which for the AZT-75739 pair exceeded grossly the critical value in the model; the DModX (normalized) was 1.83; the critical value (at the default significance level of 0.05) was 1.11.
The default significance level was 5%.
The default significance threshold of 0.001 was applied.
Different window sizes produced comparable prediction accuracies at the default significance cut-off.
Similar(37)
The difference of AUCs between LC-NB and LC-MLP has no statistical significance at a default significant level (P = 0.7871).
The default GSEA significance threshold of q<0.25 (after controlling the false discovery rate) was used for all functional analyses.
We used the default SPSS significance levels: α = 0.05 for inclusion and α = 0.1 for removal.
Enrichment analysis was performed using Fisher's exact test with default parameters (significance threshold of 0.05) available in Blast2GO to identify significantly enriched GO terms.
By default, a significance threshold of 0.01 and a minimal AUC of 0.65 are required for each gene to be considered as significant.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com