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These latter authors show an important limit for Markov models, and their mathematical results certainly help explain the limitation at deeper times.
Currently, we do not know the full details of deeper eukaryote phylogeny, probably because the ability of Markov models to reconstruct sequences (or the tree) falls off exponentially at deeper times (Mossel and Steel 2005).
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"It was a way of keeping track not of time as we think of it," he told me, "but of the movement of the stars — a deeper time".
CAD reached the highest PI peak at about 35 Ma, but was surpassed by Wnt at deeper time-scales.
However, incomplete lineage sorting can still be pervasive at deeper time scales and coalescent-based species-tree methods are able to account for this [ 27].
However, the taxonomic distinctiveness of the two taxa has no effect on inference of biogeographic relationships at a deeper time-scale.
For the reconstruction of the Trichoptera tree of life, CAD was surpassed in phylogenetic Informativeness by RNA Polymerase II (POL) at deeper time scales [ 19].
The 3rd codon positions of the nuclear protein-coding genes showed the highest PI values between 35-50 Mandnd a trailing slow decline over deeper time.
Pterosaurs from Deep Time.
This is deep time, epochal time".
Next is the concept of deep time.
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