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The plant motif is not contained within the VDAC sequences from organisms of the deeper branches of the tree: the red algae (Galdieria sulphuraria and Cyanidioschyzon merolae), and the Desmid Chlosterium peracerosum-strigosum-littorale.
While the evolutionary rates were not computed beyond the eutherian mammals (due to issues of mutational saturation in dS values), we speculate that this trend continues to deeper branches of the metazoan tree of life.
While the evolution of GATA factors within the deeper branches of the deuterostome phylogeny is well understood, it has been more difficult to reconstruct the evolution of protostome GATA factors.
The deeper branches of the Australo-Papuan clade in Figures 2 and 3 are all quite short, indicative of a period of rapid diversification, but the branching pattern varies with the methods used and no one pattern is well supported.
Thirteen out of 14 clades (all except hylids) show the predicted pattern in which deeper branches of the combined-data tree are resolved in favor of nucDNA and shallower branches are resolved in favor of mtDNA (Table 4; Additional File 1).
Thus, taking into account also the apparent underestimation by Count of events at deeper branches of the ATGC trees (see Discussion above and Figure 4), the GDE rates obtained here, even if strikingly high, should be considered as lower bound estimates.
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The deeper branching of the Thermoplasmatales within the Euryarchaeota will place it closer to the Crenarchaeota.
The deepest branches of the tree met at the very center, which represented the common ancestor of all living things.
The reason, the researchers propose, is that the cells bearing the type of receptor the avian virus is known to favor are clustered in the deepest branches of the human respiratory tract, keeping it from spreading by coughs and sneezes.
Although significant progress has been made resolving deep branches of the fungal tree of life, many fungal systematists are interested in species-level questions to both define species and assess fungal biodiversity.
The deep branches of the ACT1 phylogram did not achieve strong statistical support in the C. gattii clade, unlike the combined data set.
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