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The ethical approval as well as consent of this study was sought from Directorate of Veterinary Services who granted the approval and permission for collection of field laboratory samples on Peste des petits ruminants vide letter referenced "Ref.Meat/Vol.XIV/42 dated 1st July 2011.
Diagnosis of probable SARS was based on the standard WHO case definitions dated 1st May 2003 [ 12].
For the analysis of transcripts corresponding to annotated protein encoding ORFs, sense-strand reads mapped to features in the "pichia_format.gtf" genome annotation file dated 1st March 2012 (BOGAS (Sterck et al. 2012)) were counted using HTSeq v0.5.3 (Anders and Huber 2011) in intersection non-empty mode.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com