Sentence examples for datasets were identified and from inspiring English sources
A small number of duplicate client records in the administrative datasets were identified and removed [ 21].
Subsequently, pathways identified in all four datasets were identified and the number and scores of genes found in each dataset were summed.
A total of 3,195 overlapping genes common to both datasets were identified and used to calculate expression fold changes between our tumors and TCGA tumors.
The common overlapping genes occurring in all the three datasets were identified and ranked by cumulative rank score obtained by addition of gene ranks based on either p values or scores.
In contrast, homologues in vertebrate datasets were identified and the deduced amino acid sequences of the retrieved transcripts or predicted exon coding regions were compared using ClustalX 2.0 [ 89] with the conserved mature peptide region 1-27 aa of representatives of the secretin family with the exception of human GLP1 in which 5-32 aa were used that correspond to a unique coding exon.
Unique haplotypes in each dataset were identified and used for subsequent phylogenetic analyses [Genbank: KJ870103-KJ870137 & KJ870139-KJ870149] (Additional file 5: Table S7).
ChIP-seq experiments with replicates in the ENCODE TFBS dataset were identified and uniform TFBS peaks files for the corresponding samples were downloaded from the website http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAwgTfbsUniform/ (Uniform SPP peaks).
The genes, appearing in all the three dataset, were identified and cumulative rank score for each gene was calculated using the following equation - where, Based on their rank score the genes were re-ranked with one having the lower cumulative rank score getting the higher rank.
Importantly, these transcription factor binding site datasets were identified using the mincing strategy and therefore allow a direct comparison with the pulverization method.
These datasets were identified from Gene Expression Omnibus (GEO) or caArray and CEL files downloaded.
In 10FD, early and late datasets were identified with an 'e' or 'l' after 10FD, respectively.
