Sentence examples for datasets were calculated using from inspiring English sources
Statistical significances of the correlations between datasets were calculated using Pearson's R values.
The lengths of the branches of the morphological datasets were calculated using a Euclidean distance matrix (SAS Procedure DISTANCE SASS version 9.1.3).
The likelihood values for each of the two datasets were calculated using the default punctuation asymmetry threshold of 100.
Pearson correlation coefficients between genetic purity values obtained for all eight datasets were calculated using MINITAB v14.
P-values for association in the combined (discovery and replication) datasets were calculated using Fisher's trend approach for combining P-values as implemented in the online software MetaP (http://www.svaproject.org/metap.php).org/metap.php
Finally, coverage statistics for each sequence in both datasets was calculated using MosaikCoverage.
Subsequently the overlap of the two datasets was calculated using the database mentioned above.
To evaluate the consistency among different datasets, the agreement between the MPMs of any two datasets was calculated using NMI (Eq. 4).
The Pearson correlation coefficient between data derived from each probe-set in individual datasets was calculated using BioLayout Express3D and all correlation values written to file.
In addition, reliability of the pedigree index (PI) for bulls in the test datasets was calculated using the data of bulls born before the cut-off date to divide reference and test datasets, but each partner based their calculations on different datasets.
The accessible surface areas for all residues in our dataset were calculated using the DSSP program [38].
