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Relevant datasets were assembled and evaluated, and these were made available to scientists worldwide.
First, the experimental datasets were assembled and combined.
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To test the viability of the established protocols, a full multi-locus Dinornis dataset was assembled and examined thoroughly for signs of allelic dropout, such as a deficit of heterozygous individuals in comparison to the expected Hardy-Weinberg proportions.
The dataset was assembled and manually curated by Cui et al. by merging the interactions compiled in different databases, followed by validation of each interaction by accurate revision of the literature.
To reconstruct whole-organelle based phylogeny, pt and mt datasets were assembled on the basis of genomes available in public databases and those newly sequenced in this study.
Soil salinity and hydrologic datasets were assembled to analyze the spatio-temporal variability of salinization in Fengqiu County, Henan Province, China, in the alluvial plain of the lower reaches of the Yellow River.
Subsequently, the 454 RNAseq and EST datasets were assembled at ≥ 90%.
First, functional keywords associated with 20 or more proteins in SWISSPROT were determined and corresponding protein datasets were assembled.
These datasets were assembled using a combination of Illumina HumanMethylation27 BeadChip (27K) and Illumina HumanMethylation450 BeadChip (450K) technology.
The obtained clean read datasets were assembled using Trinity (release 20130225) [ 34] under default parameters, except for min_kmer_cov and min_glue set at three.
Various datasets were assembled to characterize the at-risk population.
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