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To assess significance, we compared our observed t-statistic to t-statistics from 104 bootstrapped datasets of comparable sizes (sampled with replacement).
To probe the chromatin features of EIs, we compared locations of EIs in H1, HAEC and HPF with public datasets of comparable cell lines [ 10, 23].
Two publicly available non-subtype specific primary breast cancer datasets of comparable size and composition (Nadiri et al.[ 26] n = 153 on Illumina WG6v1 and Desmedt et al.[ 27] n = 198 on Affymetrix HGU133A) were assigned to molecular subtypes using centroids from the intrinsic gene signatures of Sorlie et al. (2003) [ 5], Parker et al.[ 28], and Hu et al. [ 29].
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This frequency is higher than that reported in apple using a dataset of comparable size (one SNP per 706 bp from ~150,000 ESTs [ 10]).
For synthetic datasets of sizes comparable to our real data size, do we recover known ground truth information after running our Markov chains for the appropriate amount of time?
For comparison, the positive correlation observed between clinical PR status and array determined PR transcript levels from this same dataset was of comparable, albeit slightly greater, magnitude (rp = +0.24; P = 9.033 × e-07).
The CRW datasets were chosen for analysis because they have highly reliable curated alignments based on secondary and higher order structure; to our knowledge, there are no larger biological datasets with alignments of comparable reliability.
The results reveal that the best choice should be using the proper DEM datasets of spatial resolution comparable to that of the SAR images.
SSR frequencies in the two clustered and one non-clustered EST datasets of cucumber were comparable for tri-, hepta, hepta- and octanucleotides, whereas a higher frequency of dinucleotides was found in clustered ESTs (16.3 vs 12.9 for WI 1983, Table 1).
External validation was not possible given the lack of comparable datasets in multiple myeloma in which all three questionnaires were administered.
Provenance metadata supports integration of comparable datasets, facilitates correlation of data across projects, and also supports analyses of data by answering " What", " Where", " When", " Which", " Who", "Ho w", and " Why" queries (also known as the W7 model) [ 3, 4].
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