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Figure 1 Recovery of actives in each of the DUD datasets from all decoys in the DUD, averaged across all 40 datasets.
Datasets from all platforms (shipboard, aerial, shore, and tag) were included.
The datasets from all three lakes had similar levels of variation in their PC1 scores (Table 3).
Clean datasets from all sites were merged to enable cross-site analyses.
After pre-processing, sequencing datasets from all three approaches had nearly equivalent numbers of reads (Table 1).
DiffBind was used to enable a quantitative comparison between DamID datasets from all species using translated data [ 87].
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The RF results successfully identified most of the variables used to construct the principal components for eight planning zones (Table 3) and also explained more than 73% of the variance in the dataset from all of the planning zones in Marion County, Indiana (Figs. 4, 5, 6, 7, 8, 9, 10, 11).
In agreement with the simultaneously recorded data [10], the pooled dataset from all of the recorded mice again show the existence of this overall hierarchical arrangement in CA1 cell response selectivity (from general to specific-response features) (Figure 6B).
We predicted that primary vectors of cichlid divergence identified by a PCA within lakes would differ from those identified by a PCA run on the combined dataset from all lakes (Figure 2).
Accordingly, the distance between datasets was calculated as the average interpoint distance of all points in one dataset from all points in the other dataset.
Principal Components Analysis (PCA) of the H nuclear magnetic resonance (NMR) spectroscopy dataset from all time points combined demonstrated some separation according to dose (data not shown).
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