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Then, experimentally verified methylated arginines and lysines were recorded for later positive training datasets extraction by excluding those annotated by "By similarity", "Potential" or "Probable" in the description field.
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Despite restrictions, the final dataset resulted in approximately one million (1 035 040) unique PubChem compounds representing about 19% of PubChem at the time of dataset extraction.
DYW performed the microarray dataset extraction and statistical analyses.
Details of individual datasets and extraction method are provided in [ 40].
These datasets allow extraction of the exact position of cell nuclei, but do not reveal cell boundaries.
Another contribution is the AutoSeed program, which would be useful for processing of large SELECT datasets for extraction of TF binding motifs.
This resource not only facilitates unified storage for lists of proteins identified during AP-MS experiments, but also allows cross comparison of individual datasets, and extraction of information difficult to mine otherwise.
In the rest of this article, we first explain how our existing OntoGene relation mining system has been customized for the CTD dataset ('Information extraction' section), and then how it has been integrated with a conventional information retrieval (IR) system (Lucene) for the purpose of the triage task ('Integration with a standard IR system' section).
Table 4 The running time cost by each stage of our method over the Oxford flowers, UCSD birds and CMU iCoseg datasets Dataset Superpixel extraction Heat source extraction Saliency detection Local refinement Heat energy transfer and diffusion Total time (s) Oxford flowers 16.13 0.28 0.24.1428 5.21 24.14 UCSD birds 8.19 0.13.1118 1.47 3.13 13.11 CMU iCoseg 6.87 0.11.1911.1930 2.711.1911.19
The details about basin construction for the ground truth mobility datasets and flow extraction from users' traces are contained in Section 4.
A few existing systems had been analyzed in terms of precision (P), recall (R) and F1-score attainable for existing keyphrase extraction datasets.
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